Basic Information
Locus ID:
Sbi_jg3770
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000021l | 40485076 | 40487067 | + | Sbi_jg3770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 72,566.02 Da | 38.41 | 86.95 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 361 | 642 | 1.54082E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 356 | 637 | 1.1E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 640 | 6.2E-73 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 8 | 192 | 9.02E-17 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 441 | 7.1E-29 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 5 | 206 | 4.2E-16 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 652 | 2.5E-51 | - |
| SMART | SM00220 | serkin_6 | 355 | 648 | 3.3E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 644 | 37.134979 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 383 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 488 | 500 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_021760401.1 | serine/threonine-protein kinase-like protein CCR4 [Chenopodium quinoa] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M511 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology