Basic Information
Locus ID:
Sbi_jg37674
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 123600299 | 123606207 | - | Sbi_jg37674 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 20,229.30 Da | 47.57 | 89.50 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 20 | 116 | 2.3E-12 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 16 | 132 | 3.14E-18 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 8 | 134 | 1.6E-16 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 1 | 109 | 10.321825 | IPR003653 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021767575.1 | uncharacterized protein LOC110731976 isoform X1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A2P6RE63 | Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0482291 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |