Basic Information
Locus ID:
Sbi_jg37398
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 119747434 | 119751486 | - | Sbi_jg37398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 60,340.89 Da | 36.43 | 87.83 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 64 | 229 | 3.6E-19 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 403 | 462 | 1.4E-8 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 59 | 230 | 8.31E-26 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 64 | 233 | 9.6E-32 | IPR036465 |
| SMART | SM00327 | VWA_4 | 62 | 238 | 1.9E-17 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 64 | 240 | 16.48698 | IPR002035 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_010675833.1 | E3 ubiquitin-protein ligase WAV3 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9QQR0 | VWFA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_152240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology