Basic Information
Locus ID:
Sbi_jg37394
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 119630572 | 119644770 | + | Sbi_jg37394 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 81,634.54 Da | 32.42 | 72.93 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 179 | 198 | 0.021 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 545 | 559 | 0.03 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 480 | 518 | 0.035 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 602 | 619 | 0.078 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 140 | 654 | 4.71E-32 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 417 | 623 | 4.1E-23 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 136 | 318 | 3.2E-7 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_021839109.1 | uncharacterized protein LOC110778873 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9QJM9 | Protein tolB OS=Spinacia oleracea OX=3562 GN=SOVF_171710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology