Basic Information
Locus ID:
Sbi_jg3658
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000021l | 38323487 | 38327354 | - | Sbi_jg3658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 95,862.63 Da | 45.23 | 72.82 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 679 | 817 | 3.6E-11 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 640 | 841 | 5.69E-22 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 632 | 840 | 3.0E-18 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 643 | 813 | 10.484694 | IPR003653 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| Coils | Coil | Coil | 418 | 445 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021767575.1 | uncharacterized protein LOC110731976 isoform X1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803KUW7 | ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |