HalophFGD

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Basic Information
Locus ID: Sbi_jg36236
Species & Taxonomic ID: Salicornia bigelovii & 46105
Genome Assembly:
Description: transposition, RNA-mediated
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000009l 74441874 74442703 - Sbi_jg36236
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.18 25,631.80 Da 51.23 65.68 -0.65
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 173 209 - -
MobiDBLite mobidb-lite consensus disorder prediction 183 199 - -
KEGG Pathway
KO Term:
K09250 (cellular nucleic acid-binding protein)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048493237.1 uncharacterized protein LOC125491574 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A803MTB6 Retrotrans_gag domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 1 Sbi_jg36236
Anacardiaceae Pistacia vera 11 pistato.v30071390, pistato.v30079570, pistato.v30079870 ...
pistato.v30118110, pistato.v30120690, pistato.v30128520, pistato.v30153820, pistato.v30162630, pistato.v30179130, pistato.v30179200, pistato.v30198700
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.