Basic Information
Locus ID:
Sbi_jg36150
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
TRIP-1
Description:
component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 68145376 | 68147640 | - | Sbi_jg36150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 8,080.17 Da | 11.42 | 76.97 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021752732.1 | eukaryotic translation initiation factor 3 subunit I-like isoform X4 [Chenopodium quinoa] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg36150, Sbi_jg854 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg14697, Seu_jg22036, Seu_jg3800 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl74566, Sgl83234 |