Basic Information
Locus ID:
Sbi_jg35796
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 45281487 | 45291639 | + | Sbi_jg35796 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 49,607.25 Da | 37.87 | 86.64 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 176 | 235 | 1.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 82 | 120 | 1.8E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 99 | 420 | 7.99E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 427 | 1.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 244 | 3.2E-35 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 200 | 223 | 7.912173 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 201 | 214 | 6.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 291 | 304 | 6.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 79 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_010684727.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803MWV3 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology