Basic Information
Locus ID:
Sbi_jg35584
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 32993842 | 32995881 | + | Sbi_jg35584 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 74,850.83 Da | 43.33 | 87.28 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 203 | 234 | 0.00314984 | IPR018392 |
| Pfam | PF04478 | Mid2 like cell wall stress sensor | 263 | 308 | 1.2E-5 | IPR007567 |
| Pfam | PF00069 | Protein kinase domain | 381 | 649 | 1.8E-39 | IPR000719 |
| Pfam | PF01476 | LysM domain | 198 | 241 | 1.4E-5 | IPR018392 |
| Pfam | PF01476 | LysM domain | 135 | 176 | 0.094 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 649 | 4.63E-63 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 180 | 247 | 7.4E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 439 | 671 | 9.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 437 | 2.2E-15 | - |
| SMART | SM00257 | LysM_2 | 197 | 241 | 0.0019 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 653 | 32.711037 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 196 | 240 | 10.856113 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021856141.1 | protein LYK5 isoform X1 [Spinacia oleracea] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S2X7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology