Basic Information
Locus ID:
Sbi_jg34813
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 11772701 | 11776321 | + | Sbi_jg34813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 31,905.73 Da | 44.73 | 67.13 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 14 | 169 | 1.2E-57 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 4 | 93 | 2.0E-23 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 94 | 167 | 1.0E-33 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 289 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_010685726.1 | ubiquitin recognition factor in ER-associated degradation protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LCF7 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology