Basic Information
Locus ID:
Sbi_jg34438
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 5170714 | 5172852 | - | Sbi_jg34438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 76,775.22 Da | 39.12 | 83.75 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 23 | 248 | 2.70294E-82 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 372 | 643 | 2.42944E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 367 | 641 | 8.3E-52 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 23 | 255 | 1.9E-56 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 21 | 257 | 3.4E-60 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 666 | 2.6E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 258 | 1.6E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 443 | 1.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 444 | 655 | 9.3E-62 | - |
| SMART | SM00220 | serkin_6 | 366 | 643 | 9.6E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 652 | 39.156139 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 487 | 499 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 395 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 286 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021845263.1 | L-type lectin-domain containing receptor kinase VIII.1-like [Spinacia oleracea] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RP75 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_050100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology