halophFGD

Basic Information

Locus ID: Sbi_jg34410

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000009l	4806852	4810541	-	Sbi_jg34410

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.26	57,012.54 Da	50.82	60.71	-0.96

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	1	57	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	441	507	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	447	482	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	38	57	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	244	267	-	-
Coils	Coil	Coil	301	335	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT5G01970.1
RefSeq	XP_021723330.1	uncharacterized protein LOC110690747 isoform X1 [Chenopodium quinoa]
TrEMBL	A0A803MI57	Expressed conserved protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg14674, jg16733, jg35295, jg8424, jg8425, jg8803
Aizoaceae	Mesembryanthemum crystallinum	3	gene_14610, gene_24327, gene_6203
Amaranthaceae	Atriplex hortensis	4	Ah012131, Ah029575, Ah031584, Ah035376
Amaranthaceae	Beta vulgaris	2	BVRB_7g156590, BVRB_7g172790
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg2103, Sbi_jg21488, Sbi_jg22327, Sbi_jg26745 ... Sbi_jg33810, Sbi_jg34410
Amaranthaceae	Salicornia europaea	3	Seu_jg16258, Seu_jg2666, Seu_jg8508
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00003684, GOSA_00005827, GOSA_00008843
Amaranthaceae	Suaeda glauca	6	Sgl01636, Sgl06798, Sgl62801, Sgl67417, Sgl71156, Sgl74738
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000006787, gene:ENSEOMG00000007709 ... gene:ENSEOMG00000017263, gene:ENSEOMG00000019085, gene:ENSEOMG00000037128, gene:ENSEOMG00000038627, gene:ENSEOMG00000040003, gene:ENSEOMG00000049366
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1BG0020310, CQ.Regalona.r1.2AG0022060 ... CQ.Regalona.r1.7AG0015630, CQ.Regalona.r1.7AG0023380, CQ.Regalona.r1.7BG0019020, CQ.Regalona.r1.7BG0026050
Anacardiaceae	Pistacia vera	3	pistato.v30027220, pistato.v30082800, pistato.v30131790
Apiaceae	Apium graveolens	5	Ag10G01012, Ag11G04060, Ag2G01233, Ag9G02150, Ag9G02312
Arecaceae	Cocos nucifera	7	COCNU_04G012220, COCNU_07G015120, COCNU_10G009500 ... COCNU_12G006070, COCNU_16G005540, scaffold005796G000010, scaffold037569G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103702166, gene-LOC103705919, gene-LOC103716692
Asparagaceae	Asparagus officinalis	6	AsparagusV1_02.1619.V1.1, AsparagusV1_04.3358.V1.1 ... AsparagusV1_05.584.V1.1, AsparagusV1_07.3135.V1.1, AsparagusV1_07.743.V1.1, AsparagusV1_08.3305.V1.1
Asteraceae	Flaveria trinervia	7	Ftri10G00984, Ftri10G25066, Ftri10G32763, Ftri11G00535 ... Ftri15G26144, Ftri9G09186, Ftri9G09821
Brassicaceae	Arabidopsis thaliana	4	AT1G30050.1, AT2G30530.1, AT4G02800.1, AT5G01970.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10007824m.g.v1.0, Thhalv10013951m.g.v1.0 ... Thhalv10016861m.g.v1.0, Thhalv10028780m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g25920.v2.2, Sp4g13080.v2.2, Sp6g02830.v2.2 ... Sp6g41210.v2.2
Brassicaceae	Brassica nigra	7	BniB01g013690.2N, BniB03g016330.2N, BniB03g034260.2N ... BniB04g045370.2N, BniB08g019020.2N, BniB08g039350.2N, BniB08g039380.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq06G2117, Ceq08G0857, Ceq08G2473
Casuarinaceae	Casuarina glauca	3	Cgl06G2229, Cgl08G0875, Cgl08G2714
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno02g00980, gene.Cymno03g04450, gene.Cymno05g12950
Dunaliellaceae	Dunaliella salina	1	Dusal.0361s00011.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate06g06290, gene.Thate07g00500, gene.Thate08g04060
Malvaceae	Hibiscus hamabo Siebold & Zucc.	6	nbisL1-mrna-12516, nbisL1-mrna-2161, nbisL1-mrna-4516 ... nbisL1-mrna-4864, nbisL1-mrna-5356, nbisL1-mrna-633
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.518, evm.TU.LG01.828, evm.TU.LG04.1062
Plantaginaceae	Plantago ovata	4	Pov_00002577, Pov_00008083, Pov_00008084, Pov_00036714
Plumbaginaceae	Limonium bicolor	3	Lb4G22591, Lb4G22603, Lb4G25695
Poaceae	Echinochloa crus-galli	14	AH04.96, AH05.20, AH05.2004, AH05.3063, AH07.3290, BH04.104 ... BH05.2145, BH05.3105, BH05.50, BH07.3109, CH05.2208, CH05.3149, CH05.84, CH07.3176
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_4AG0325270, gene-QOZ80_4BG0354860 ... gene-QOZ80_5AG0369130, gene-QOZ80_5AG0377880, gene-QOZ80_5BG0416750, gene-QOZ80_5BG0424990, gene-QOZ80_5BG0433560, gene-QOZ80_9AG0672700, gene-QOZ80_9BG0696320
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0032710.1, HORVU.MOREX.r3.1HG0070620.1 ... HORVU.MOREX.r3.2HG0104690.1, HORVU.MOREX.r3.4HG0353200.1
Poaceae	Oryza coarctata	11	Oco07G001740, Oco08G002200, Oco09G006420, Oco09G012440 ... Oco10G006630, Oco10G012530, Oco22G000650, Oco23G000110, Oco23G000630, Ocoptg000086lG000050, Ocoptg000139lG000020
Poaceae	Oryza sativa	5	LOC_Os04g15800.1, LOC_Os05g25070.1, LOC_Os05g40310.1 ... LOC_Os11g02640.1, LOC_Os12g02570.1
Poaceae	Paspalum vaginatum	4	gene-BS78_04G070400, gene-BS78_08G016300 ... gene-BS78_09G090400, gene-BS78_09G181600
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0103779, Pt_Chr0108035, Pt_Chr0303626, Pt_Chr0305809 ... Pt_Chr0501300, Pt_Chr0501337, Pt_Chr0504533, Pt_Chr0504545
Poaceae	Sporobolus alterniflorus	11	Chr07G022080, Chr17G009120, Chr18G006510, Chr18G012350 ... Chr22G005410, Chr22G011540, Chr23G017060, Chr25G014060, Chr26G002790, Chr30G014110, Chr31G000420
Poaceae	Thinopyrum elongatum	5	Tel1E01G235100, Tel1E01G490200, Tel2E01G149500 ... Tel2E01G150500, Tel4E01G195600
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG018500, gene_TRIDC1AG044970 ... gene_TRIDC1BG023390, gene_TRIDC1BG050980, gene_TRIDC2AG007450, gene_TRIDC2BG008610, gene_TRIDC4AG030780, gene_TRIDC4BG019100
Poaceae	Triticum aestivum	12	TraesCS1A02G128300.1, TraesCS1A02G303000.2 ... TraesCS1B02G146700.2, TraesCS1B02G313300.1, TraesCS1D02G124900.2, TraesCS1D02G302400.1, TraesCS2A02G067400.1, TraesCS2B02G079600.1, TraesCS2D02G065700.1, TraesCS4A02G192700.1, TraesCS4B02G122600.2, TraesCS4D02G120600.1
Poaceae	Zea mays	5	Zm00001eb086650_P001, Zm00001eb163810_P001 ... Zm00001eb290930_P001, Zm00001eb350740_P002, Zm00001eb352110_P004
Poaceae	Zoysia japonica	8	nbis-gene-14267, nbis-gene-21641, nbis-gene-25360 ... nbis-gene-26975, nbis-gene-32222, nbis-gene-34926, nbis-gene-42165, nbis-gene-47909
Poaceae	Zoysia macrostachya	5	Zma_g18349, Zma_g20989, Zma_g26985, Zma_g28042, Zma_g28454
Portulacaceae	Portulaca oleracea	5	evm.TU.LG10.13, evm.TU.LG14.1839, evm.TU.LG16.1539 ... evm.TU.LG17.10, evm.TU.LG26.124
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g27610, gene.Posoc02g10050, gene.Posoc02g33050
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_14_RagTag.800, evm.TU.Scaffold_1_RagTag.1061 ... evm.TU.Scaffold_2_RagTag.1287, evm.TU.Scaffold_5_RagTag.978
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-11365, nbisL1-mrna-16380, nbisL1-mrna-21300 ... nbisL1-mrna-3932, nbisL1-mrna-3949, nbisL1-mrna-6543
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-13633, nbisL1-mrna-19903, nbisL1-mrna-3778 ... nbisL1-mrna-6703
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-11595, nbisL1-mrna-17130, nbisL1-mrna-18731 ... nbisL1-mrna-18732, nbisL1-mrna-21146
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000009l.158, evm.TU.utg000006l.299 ... evm.TU.utg000016l.874, evm.TU.utg000025l.29
Rhizophoraceae	Kandelia obovata	3	Maker00012252, Maker00013466, Maker00016966
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-11058, nbisL1-mrna-15879, nbisL1-mrna-17305 ... nbisL1-mrna-9990
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-13271, nbisL1-mrna-24761, nbisL1-mrna-5143 ... nbisL1-mrna-7600, nbisL1-mrna-8969
Salicaceae	Populus euphratica	6	populus_peu11542, populus_peu14516, populus_peu15034 ... populus_peu17037, populus_peu25221, populus_peu32695
Solanaceae	Lycium barbarum	4	gene-LOC132605273, gene-LOC132605599, gene-LOC132631240 ... gene-LOC132644086
Solanaceae	Solanum chilense	3	SOLCI004634600, SOLCI006272200, SOLCI006761300
Solanaceae	Solanum pennellii	4	gene-LOC107002575, gene-LOC107021605, gene-LOC107030178 ... gene-LOC107031661
Tamaricaceae	Reaumuria soongarica	3	STRG.1608_chr01_+, gene_3669, gene_4273
Tamaricaceae	Tamarix chinensis	3	TC06G1220, TC07G0930, TC11G2420
Zosteraceae	Zostera marina	4	Zosma01g29070.v3.1, Zosma03g30470.v3.1, Zosma04g20640.v3.1 ... Zosma05g24940.v3.1