Basic Information
Locus ID:
Sbi_jg34401
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 4697019 | 4709600 | - | Sbi_jg34401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 104,853.44 Da | 35.40 | 95.40 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 889 | 1.92619E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 2.0E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 619 | 886 | 1.0E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 390 | 1.53E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 912 | 1.12E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 587 | 692 | 9.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 186 | 1.0E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 908 | 1.9E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 420 | 8.5E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 286 | 6.9E-26 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 218 | 242 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 73.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 617 | 893 | 6.8E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 5.4 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 890 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021767435.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803L3K8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology