Basic Information
Locus ID:
Sbi_jg34007
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000017l | 125997501 | 126013003 | - | Sbi_jg34007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 191,621.30 Da | 58.31 | 79.39 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 305 | 333 | 1.17206E-7 | - |
| Pfam | PF00225 | Kinesin motor domain | 594 | 925 | 3.8E-108 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 588 | 959 | 3.8E-118 | IPR027417 |
| SUPERFAMILY | SSF57850 | RING/U-box | 304 | 336 | 2.36E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 275 | 343 | 2.4E-8 | IPR013083 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 583 | 937 | 5.8E-136 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 586 | 933 | 8.8E-162 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 588 | 925 | 119.491508 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 821 | 832 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 660 | 681 | 3.5E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 875 | 896 | 3.5E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 789 | 806 | 3.5E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 822 | 840 | 3.5E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 122 | - | - |
| Coils | Coil | Coil | 1312 | 1332 | - | - |
| Coils | Coil | Coil | 1284 | 1304 | - | - |
| Coils | Coil | Coil | 1473 | 1507 | - | - |
| Coils | Coil | Coil | 1013 | 1047 | - | - |
| Coils | Coil | Coil | 1563 | 1590 | - | - |
| Coils | Coil | Coil | 1191 | 1218 | - | - |
| Coils | Coil | Coil | 939 | 959 | - | - |
| Coils | Coil | Coil | 274 | 299 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LE15 | Kinesin motor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology