Basic Information
Locus ID:
Sbi_jg33581
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000017l | 120465712 | 120476563 | + | Sbi_jg33581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 60,338.82 Da | 44.69 | 77.05 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 208 | 4.8E-77 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 250 | 476 | 7.0E-60 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 267 | 442 | 2.4E-213 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 8 | 479 | 2.4E-213 | IPR011990 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_021716397.1 | proteinaceous RNase P 2-like [Chenopodium quinoa] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology