Basic Information
Locus ID:
Sbi_jg33098
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Glutelin
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000017l | 105935702 | 105937760 | - | Sbi_jg33098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 38,565.81 Da | 27.33 | 84.86 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 18 | 173 | 1.05028E-67 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 199 | 354 | 3.8465E-80 | - |
| Pfam | PF00190 | Cupin | 200 | 337 | 1.0E-21 | IPR006045 |
| Pfam | PF00190 | Cupin | 16 | 156 | 9.9E-26 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 48 | 346 | 6.9E-49 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 3 | 195 | 3.8E-32 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 196 | 356 | 3.5E-51 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 2.2E-29 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 196 | 340 | 1.2E-14 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 212 | 232 | 8.1E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 277 | 292 | 8.1E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 295 | 313 | 8.1E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 317 | 334 | 8.1E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 259 | 275 | 8.1E-14 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021764762.1 | 12S seed storage globulin 2-like [Chenopodium quinoa] | 0 |
| Q9ZWA9 | 12S seed storage protein CRD OS=Arabidopsis thaliana OX=3702 GN=CRD PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MQG8 | 11S globulin OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology