HalophFGD

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Basic Information
Locus ID: Sbi_jg32691
Species & Taxonomic ID: Salicornia bigelovii & 46105
Genome Assembly:
Description: DNA RNA polymerases superfamily protein
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000017l 85200529 85200810 - Sbi_jg32691
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.54 10,602.77 Da 44.36 47.20 -0.87
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF53098 Ribonuclease H-like 4 88 1.31E-9 IPR012337
Gene3D G3DSA:3.30.420.10 - 2 93 1.3E-8 IPR036397
MobiDBLite mobidb-lite consensus disorder prediction 75 93 - -
MobiDBLite mobidb-lite consensus disorder prediction 74 93 - -
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_011624299.1 uncharacterized protein LOC105420836, partial [Amborella trichopoda] 0
TrEMBL A0A438GJG8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_496 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 3 Sbi_jg32691, Sbi_jg54070, Sbi_jg60491
Brassicaceae Schrenkiella parvula 1 Sp1g28950.v2.2
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.