halophFGD

Basic Information

Locus ID: Sbi_jg32289

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: Serine threonine-protein kinase AFC2-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000017l	56940123	56941932	-	Sbi_jg32289

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.90	11,111.70 Da	25.48	85.21	0.05

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	17	91	1.02E-12	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	18	91	1.6E-20	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	96	9.375802	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K08287 (dual-specificity kinase [EC:2.7.12.1])

Best hit

Source	Best Hit ID	Description
TAIR	AT4G24740.10	-
RefSeq	XP_048502409.1	serine/threonine-protein kinase AFC2 isoform X5 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	P51566	Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2
TrEMBL	A0A7C8Z827	Dual-specificity kinase (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg32289, Sbi_jg47531, Sbi_jg56976