Basic Information
Locus ID:
Sbi_jg31927
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
CDKD-1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000017l | 36554449 | 36556748 | + | Sbi_jg31927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 7,609.94 Da | 61.85 | 85.76 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 64 | 1.4E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 21 | 64 | 1.6E-11 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18040.1 | cyclin-dependent kinase D1;3. | 0 |
| RefSeq | XP_021857964.1 | cyclin-dependent kinase D-1 isoform X2 [Spinacia oleracea] | 0 |
| A2Y4B6 | Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKD-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QLM9 | [RNA-polymerase]-subunit kinase OS=Spinacia oleracea OX=3562 GN=SOVF_165210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31927, Sbi_jg5248 |