Basic Information
Locus ID:
Sbi_jg3120
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000021l | 24957462 | 24958108 | + | Sbi_jg3120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 16,027.29 Da | 67.51 | 80.07 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 25 | 109 | 5.65E-7 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 18 | 130 | 5.2E-15 | - |
KEGG Pathway
KO Term:
Pathway:
ko03030 (DNA replication)
map03030 (DNA replication)
ko03420 (Nucleotide excision repair)
map03420 (Nucleotide excision repair)
ko03430 (Mismatch repair)
map03430 (Mismatch repair)
ko03440 (Homologous recombination)
map03440 (Homologous recombination)
ko03460 (Fanconi anemia pathway)
map03460 (Fanconi anemia pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021859321.1 | replication protein A 70 kDa DNA-binding subunit B-like [Spinacia oleracea] | 0 |
| TrEMBL | A0A2P6RZZ0 | Putative replication protein A, OB OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0150581 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology