Basic Information
Locus ID:
Sbi_jg30414
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000017l | 111134 | 126187 | - | Sbi_jg30414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 62,083.50 Da | 38.41 | 85.96 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 63 | 321 | 3.9377E-138 | - |
| Pfam | PF13499 | EF-hand domain pair | 370 | 429 | 7.3E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 440 | 507 | 3.5E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 64 | 322 | 5.0E-76 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 350 | 533 | 3.46E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 328 | 4.86E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 149 | 2.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 330 | 7.9E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 331 | 510 | 7.7E-51 | - |
| SMART | SM00054 | efh_1 | 441 | 469 | 8.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 481 | 509 | 1.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 405 | 433 | 0.0041 | IPR002048 |
| SMART | SM00220 | serkin_6 | 64 | 322 | 2.6E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 369 | 397 | 3.4E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 13.286007 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 15.489744 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 64 | 322 | 49.007538 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 472 | 13.927603 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 401 | 436 | 10.189618 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 450 | 462 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 378 | 390 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 414 | 426 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 70 | 93 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 184 | 196 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_010678598.1 | calcium-dependent protein kinase 10 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1C0 | Calcium-dependent protein kinase 30 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology