Basic Information
Locus ID:
Sbi_jg30333
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
AFC1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000027l | 10991139 | 10994511 | - | Sbi_jg30333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 17,542.79 Da | 48.98 | 85.07 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 68 | 145 | 6.6E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 145 | 5.19E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 147 | 5.7E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 150 | 11.02948 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32660.2 | Protein kinase superfamily protein. Encodes protein kinase AME3. | 0 |
| RefSeq | XP_021744032.1 | serine/threonine-protein kinase AFC3-like [Chenopodium quinoa] | 0 |
| P51568 | Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana OX=3702 GN=AFC3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803N928 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg30333 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000041860 |
| Apiaceae | Apium graveolens | 3 | Ag11G03694, Ag11G04925, Ag1G01291 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0233780 |