Basic Information
Locus ID:
Sbi_jg30054
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000027l | 6170875 | 6171330 | - | Sbi_jg30054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 17,359.08 Da | 46.94 | 106.42 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 9 | 45 | 1.4E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 78 | 9.68E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 92 | 7.6E-8 | - |
| SMART | SM00256 | fbox_2 | 9 | 49 | 1.7E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 3 | 53 | 8.649649 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33290.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_050210881.1 | F-box/kelch-repeat protein At3g06240-like [Mercurialis annua] | 0 |
| TrEMBL | B9SNB1 | F-box domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0174350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg30052, Sbi_jg30053, Sbi_jg30054, Sbi_jg30055 |