Basic Information
Locus ID:
Sbi_jg2986
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000021l | 18818389 | 18822352 | - | Sbi_jg2986 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 70,576.97 Da | 35.68 | 96.28 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 59 | 5.3E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 363 | 625 | 3.4E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 171 | 4.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 203 | 1.46E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 364 | 627 | 1.97E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 638 | 4.5E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 131 | 2.3E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 232 | 8.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 434 | 2.1E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 628 | 33.389469 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 160 | 182 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 388 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021759790.1 | probable inactive receptor kinase At1g48480 [Chenopodium quinoa] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QTC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_143590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology