Basic Information
Locus ID:
Sbi_jg29714
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000027l | 1035196 | 1038375 | + | Sbi_jg29714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 41,782.84 Da | 46.62 | 43.35 | -1.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 85 | 140 | 2.7E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 260 | 317 | 3.5E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 83 | 143 | 1.83E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 251 | 319 | 5.75E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 244 | 320 | 3.9E-34 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 77 | 144 | 2.8E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 84 | 142 | 7.6E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 259 | 318 | 2.5E-36 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 254 | 319 | 35.920883 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 79 | 143 | 24.432003 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 153 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.2 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_010670218.3 | probable WRKY transcription factor 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QGS9 | WRKY transcription factor OS=Spinacia oleracea OX=3562 GN=SOVF_180300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology