halophFGD

Basic Information

Locus ID: Sbi_jg29061

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: Serine threonine-protein phosphatase 7 long form homolog

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000008l	89888640	89889507	+	Sbi_jg29061

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.88	28,351.56 Da	74.48	67.07	-0.70

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	184	259	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	93	172	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	223	237	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	184	209	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	128	172	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	93	120	-	-

KEGG Pathway

KO Term:

K12448 (UDP-arabinose 4-epimerase [EC:5.1.3.5])

Pathway:

ko00520 (Amino sugar and nucleotide sugar metabolism) map00520 (Amino sugar and nucleotide sugar metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R01473 (UDP-L-arabinose <=> UDP-D-xylose)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021720347.1	uncharacterized protein LOC110687990 [Chenopodium quinoa]	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	3	gene_22859, gene_3677, gene_6214
Amaranthaceae	Atriplex hortensis	3	Ah006596, Ah026904, Ah033066
Amaranthaceae	Salicornia bigelovii	69	Sbi_jg10574, Sbi_jg13161, Sbi_jg14289, Sbi_jg1461, Sbi_jg387 ... Sbi_jg14856, Sbi_jg15414, Sbi_jg15892, Sbi_jg16038, Sbi_jg16039, Sbi_jg17017, Sbi_jg17794, Sbi_jg18859, Sbi_jg20587, Sbi_jg20588, Sbi_jg20867, Sbi_jg21189, Sbi_jg21625, Sbi_jg21647, Sbi_jg24890, Sbi_jg25766, Sbi_jg25953, Sbi_jg2664, Sbi_jg27245, Sbi_jg27641, Sbi_jg28233, Sbi_jg28910, Sbi_jg28911, Sbi_jg29061, Sbi_jg29112, Sbi_jg29611, Sbi_jg31906, Sbi_jg32112, Sbi_jg33156, Sbi_jg33231, Sbi_jg35307, Sbi_jg36910, Sbi_jg36911, Sbi_jg37659, Sbi_jg37848, Sbi_jg38014, Sbi_jg38932, Sbi_jg39378, Sbi_jg42150, Sbi_jg44837, Sbi_jg45166, Sbi_jg47353, Sbi_jg48179, Sbi_jg48916, Sbi_jg49321, Sbi_jg49402, Sbi_jg49989, Sbi_jg51529, Sbi_jg52012, Sbi_jg52446, Sbi_jg53066, Sbi_jg58931, Sbi_jg59606, Sbi_jg59607, Sbi_jg59648, Sbi_jg59926, Sbi_jg61368, Sbi_jg6157, Sbi_jg62907, Sbi_jg62959, Sbi_jg62967, Sbi_jg6306, Sbi_jg63114, Sbi_jg9987
Amaranthaceae	Salicornia europaea	2	Seu_jg15751, Seu_jg21945
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00026342
Apiaceae	Apium graveolens	1	Ag9G00627
Plumbaginaceae	Limonium bicolor	2	Lb2G10686, Lb3G16601
Poaceae	Oryza coarctata	2	Oco13G014430, Oco16G012190
Solanaceae	Lycium barbarum	3	gene-LOC132599869, gene-LOC132609715, gene-LOC132622063
Solanaceae	Solanum chilense	2	SOLCI003030300, SOLCI005764100
Solanaceae	Solanum pennellii	3	gene-LOC114074771, gene-LOC114075281, gene-LOC114078436