Basic Information
Locus ID:
Sbi_jg29003
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 88826114 | 88836411 | - | Sbi_jg29003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 44,929.52 Da | 35.99 | 70.12 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 290 | 394 | 7.46E-9 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 222 | 394 | 1.7E-6 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 2 | 34 | 1.6E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 92 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00990.2 | - | 0 |
| RefSeq | XP_019189402.1 | PREDICTED: uncharacterized protein LOC109183794 [Ipomoea nil] | 0 |
| TrEMBL | A0A803MYS1 | ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |