Basic Information
Locus ID:
Sbi_jg28953
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 87604002 | 87607807 | + | Sbi_jg28953 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 71,739.19 Da | 36.63 | 93.78 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 371 | 633 | 3.9E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 67 | 6.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 4.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 211 | 9.72E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 635 | 2.11E-61 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 138 | 1.0E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 651 | 1.2E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 358 | 442 | 2.2E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 240 | 2.4E-17 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 368 | 636 | 32.809975 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 374 | 396 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 643 | 662 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 641 | 662 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021759790.1 | probable inactive receptor kinase At1g48480 [Chenopodium quinoa] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QTC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_143590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology