HalophFGD

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Basic Information
Locus ID: Sbi_jg28195
Species & Taxonomic ID: Salicornia bigelovii & 46105
Genome Assembly:
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000008l 59580120 59582954 - Sbi_jg28195
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.61 14,903.56 Da 124.21 44.15 -0.95
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 93 117 - -
MobiDBLite mobidb-lite consensus disorder prediction 29 64 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 135 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_031104388.1 secreted RxLR effector protein 161-like [Ipomoea triloba] 0
TrEMBL A0A0J8BEK1 Zinc finger, CCHC-type OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_1g020780 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 53 Sbi_jg10635, Sbi_jg10720, Sbi_jg1293, Sbi_jg13061 ...
Sbi_jg18564, Sbi_jg20154, Sbi_jg22909, Sbi_jg23548, Sbi_jg2624, Sbi_jg26374, Sbi_jg26376, Sbi_jg27672, Sbi_jg28195, Sbi_jg28357, Sbi_jg28789, Sbi_jg31540, Sbi_jg32427, Sbi_jg34902, Sbi_jg35467, Sbi_jg35520, Sbi_jg35797, Sbi_jg36303, Sbi_jg37449, Sbi_jg38994, Sbi_jg38998, Sbi_jg39124, Sbi_jg40215, Sbi_jg40729, Sbi_jg40921, Sbi_jg40961, Sbi_jg41293, Sbi_jg41718, Sbi_jg45579, Sbi_jg47260, Sbi_jg47861, Sbi_jg4840, Sbi_jg49551, Sbi_jg50252, Sbi_jg51327, Sbi_jg51946, Sbi_jg53980, Sbi_jg5405, Sbi_jg54236, Sbi_jg54332, Sbi_jg55467, Sbi_jg5680, Sbi_jg57078, Sbi_jg57460, Sbi_jg59106, Sbi_jg59326, Sbi_jg7370, Sbi_jg8928, Sbi_jg9329
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.