Basic Information
Locus ID:
Sbi_jg27794
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 35353082 | 35358902 | + | Sbi_jg27794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 136,672.16 Da | 44.32 | 71.02 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 648 | 746 | 1.2E-11 | IPR003653 |
| Pfam | PF03732 | Retrotransposon gag protein | 949 | 1040 | 3.5E-7 | IPR005162 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 566 | 775 | 2.16E-23 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 558 | 775 | 3.3E-19 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 554 | 739 | 10.722733 | IPR003653 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1189 | 1210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| Coils | Coil | Coil | 837 | 857 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019102886.2 | uncharacterized protein LOC109133694 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803MYS1 | ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |