Basic Information
Locus ID:
Sbi_jg27649
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 28639255 | 28645447 | - | Sbi_jg27649 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 145,717.02 Da | 42.71 | 71.43 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 502 | 570 | 1.3E-16 | IPR025312 |
| Pfam | PF02992 | Transposase family tnp2 | 28 | 84 | 1.8E-7 | IPR004242 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 228 | 340 | 9.7E-35 | IPR025452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 724 | - | - |
| Coils | Coil | Coil | 1054 | 1081 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021835246.1 | uncharacterized protein LOC110774953 [Spinacia oleracea] | 0 |
| TrEMBL | A0A151S6U3 | PREDICTED: transposon (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_027696 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |