Basic Information
Locus ID:
Sbi_jg27521
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Glutelin
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 23991978 | 23995004 | + | Sbi_jg27521 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 38,522.65 Da | 26.07 | 85.14 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 199 | 354 | 3.02795E-80 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 18 | 173 | 1.18479E-66 | - |
| Pfam | PF00190 | Cupin | 199 | 338 | 1.2E-21 | IPR006045 |
| Pfam | PF00190 | Cupin | 16 | 156 | 1.4E-25 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 48 | 346 | 8.92E-48 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 23 | 179 | 2.1E-31 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 194 | 356 | 2.1E-51 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 196 | 340 | 6.8E-16 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 6.9E-30 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 259 | 275 | 4.7E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 295 | 313 | 4.7E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 317 | 334 | 4.7E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 277 | 292 | 4.7E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 212 | 232 | 4.7E-15 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021764762.1 | 12S seed storage globulin 2-like [Chenopodium quinoa] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MQG8 | 11S globulin OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology