Basic Information
Locus ID:
Sbi_jg27065
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 8856469 | 8864036 | - | Sbi_jg27065 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 75,205.64 Da | 46.64 | 78.09 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 15 | 149 | 1.01373E-44 | - |
| CDD | cd14066 | STKc_IRAK | 409 | 662 | 8.60791E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 405 | 661 | 8.9E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 15 | 130 | 1.8E-6 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 663 | 8.63E-70 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 130 | 6.2E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 475 | 2.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 476 | 672 | 2.0E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 134 | 8.9E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 403 | 667 | 1.3E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 403 | 667 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 521 | 533 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 228 | - | - |
| Coils | Coil | Coil | 353 | 373 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021716489.1 | U-box domain-containing protein 35-like [Chenopodium quinoa] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LDB8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology