Basic Information
Locus ID:
Sbi_jg27064
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 8830334 | 8841616 | - | Sbi_jg27064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 83,118.70 Da | 43.91 | 71.73 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 480 | 740 | 4.85268E-86 | - |
| CDD | cd01989 | STK_N | 13 | 155 | 2.77061E-51 | - |
| Pfam | PF00582 | Universal stress protein family | 14 | 129 | 7.7E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 476 | 732 | 1.1E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 446 | 733 | 8.77E-70 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 130 | 2.6E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 547 | 743 | 5.4E-49 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 132 | 3.2E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 451 | 546 | 1.7E-26 | - |
| SMART | SM00220 | serkin_6 | 474 | 738 | 1.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 474 | 738 | 35.029011 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 592 | 604 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 216 | - | - |
| Coils | Coil | Coil | 404 | 424 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021716647.1 | U-box domain-containing protein 35-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LDB7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology