Basic Information
Locus ID:
Sbi_jg26968
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 7182145 | 7193025 | - | Sbi_jg26968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 60,348.82 Da | 44.34 | 75.58 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 251 | 476 | 1.2E-58 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 208 | 5.4E-77 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 267 | 442 | 1.3E-211 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 8 | 479 | 1.3E-211 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 529 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_010686045.2 | proteinaceous RNase P 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology