halophFGD

Basic Information

Locus ID: Sbi_jg2666

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: phosphatase 2A 55 kDa regulatory subunit B

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000021l	2049740	2052286	+	Sbi_jg2666

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.57	18,467.77 Da	35.44	93.14	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	16	158	2.56E-8	IPR036322
ProSitePatterns	PS01024	Protein phosphatase 2A regulatory subunit PR55 signature 1.	117	131	-	IPR018067

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K04354 (serine/threonine-protein phosphatase 2A regulatory subunit B)

Pathway:

ko03015 (mRNA surveillance pathway) map03015 (mRNA surveillance pathway) ko04071 (Sphingolipid signaling pathway) map04071 (Sphingolipid signaling pathway) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04390 (Hippo signaling pathway) map04390 (Hippo signaling pathway) ko04391 (Hippo signaling pathway - fly) map04391 (Hippo signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G17720.2	Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B
RefSeq	XP_028794711.1	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Prosopis alba]
Swiss-Prot	Q39247	Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1
TrEMBL	A0A7J9G988	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) OS=Gossypium harknessii OX=34285 GN=Gohar_018491 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg2666, Sbi_jg61471, Sbi_jg61473
Apiaceae	Apium graveolens	2	Ag3G02863, Ag6G01409
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.306.V1.1, AsparagusV1_Unassigned.1123.V1.1
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG08.1054