Basic Information
Locus ID:
Sbi_jg26557
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 1782936 | 1798738 | + | Sbi_jg26557 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 302,723.44 Da | 54.57 | 87.32 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 245 | 576 | 1.7E-107 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 239 | 610 | 1.02E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 234 | 588 | 2.8E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 237 | 584 | 6.7E-162 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 239 | 576 | 119.186386 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 472 | 483 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 311 | 332 | 2.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 440 | 457 | 2.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 526 | 547 | 2.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 473 | 491 | 2.0E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 73 | - | - |
| Coils | Coil | Coil | 2604 | 2624 | - | - |
| Coils | Coil | Coil | 1215 | 1242 | - | - |
| Coils | Coil | Coil | 2009 | 2029 | - | - |
| Coils | Coil | Coil | 590 | 610 | - | - |
| Coils | Coil | Coil | 1125 | 1159 | - | - |
| Coils | Coil | Coil | 1770 | 1797 | - | - |
| Coils | Coil | Coil | 2121 | 2162 | - | - |
| Coils | Coil | Coil | 964 | 984 | - | - |
| Coils | Coil | Coil | 2458 | 2541 | - | - |
| Coils | Coil | Coil | 1882 | 1902 | - | - |
| Coils | Coil | Coil | 2058 | 2078 | - | - |
| Coils | Coil | Coil | 992 | 1012 | - | - |
| Coils | Coil | Coil | 665 | 699 | - | - |
| Coils | Coil | Coil | 1396 | 1416 | - | - |
| Coils | Coil | Coil | 2254 | 2288 | - | - |
| Coils | Coil | Coil | 1735 | 1755 | - | - |
| Coils | Coil | Coil | 1580 | 1607 | - | - |
| Coils | Coil | Coil | 2184 | 2246 | - | - |
| Coils | Coil | Coil | 1326 | 1353 | - | - |
| Coils | Coil | Coil | 836 | 870 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LE15 | Kinesin motor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology