halophFGD

Basic Information

Locus ID: Sbi_jg26453

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: F-box associated domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000008l	29259	29706	-	Sbi_jg26453

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.00	12,040.07 Da	68.39	91.04	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	15	51	5.4E-4	IPR001810
SUPERFAMILY	SSF81383	F-box domain	14	60	3.92E-8	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	9	67	2.9E-6	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021840596.1	F-box/kelch-repeat protein At3g23880-like [Spinacia oleracea]	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg26453, Sbi_jg30051
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000039212
Plantaginaceae	Plantago ovata	1	Pov_00005187
Salicaceae	Populus euphratica	1	populus_peu24289