halophFGD

Basic Information

Locus ID: Sbi_jg25971

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: Serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000016l	29043317	29044890	+	Sbi_jg25971

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.08	25,957.55 Da	55.33	90.49	-0.20

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	1	136	3.4E-30	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	209	1.62E-52	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	208	9.2E-54	-
SMART	SM00220	serkin_6	2	181	2.4E-7	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	179	27.340115	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	52	64	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G11330.1	S-locus lectin protein kinase family protein.
RefSeq	XP_021719529.1	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 [Chenopodium quinoa]
Swiss-Prot	Q9SXB8	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3
TrEMBL	A0A803LL32	Receptor-like serine/threonine-protein kinase SD1-8 OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah017725
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg25971
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000012040, gene:ENSEOMG00000033327 ... gene:ENSEOMG00000046916
Poaceae	Sporobolus alterniflorus	1	Chr26G016300
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-21987, nbisL1-mrna-23878