Basic Information
Locus ID:
Sbi_jg25778
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000016l | 22567985 | 22573821 | + | Sbi_jg25778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 77,682.01 Da | 48.57 | 87.84 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 370 | 664 | 1.13689E-124 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 344 | 650 | 3.5E-90 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 370 | 676 | 1.66E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 373 | 671 | 3.8E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 131 | - | - |
| Coils | Coil | Coil | 249 | 269 | - | - |
| Coils | Coil | Coil | 301 | 321 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_021766720.1 | probable galacturonosyltransferase 4 [Chenopodium quinoa] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M1G8 | Hexosyltransferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology