Basic Information
Locus ID:
Sbi_jg25686
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000016l | 19855762 | 19864420 | + | Sbi_jg25686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 61,979.76 Da | 27.64 | 110.07 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 479 | 529 | 1.6E-18 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 40 | 438 | 2.7E-49 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 34 | 471 | 7.0E-98 | - |
| PIRSF | PIRSF006060 | AA_transporter | 21 | 544 | 1.3E-69 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_021857110.1 | cationic amino acid transporter 1 [Spinacia oleracea] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4Q8C7 | AA_permease_C domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_028504 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology