Basic Information
Locus ID:
Sbi_jg24876
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000016l | 4311789 | 4314833 | + | Sbi_jg24876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 25,311.84 Da | 55.98 | 77.64 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 88 | 198 | 1.2E-14 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 85 | 211 | 1.24E-20 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 19 | 210 | 1.3E-17 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 1 | 176 | 10.459637 | IPR003653 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021837358.1 | uncharacterized protein LOC110777058 isoform X1 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9QYZ5 | ULP_PROTEASE domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_132170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |