Basic Information
Locus ID:
Sbi_jg24797
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000016l | 2939021 | 2944201 | + | Sbi_jg24797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 70,165.60 Da | 30.78 | 93.55 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 7.8E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 299 | 564 | 1.8E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 1.2E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 568 | 4.86E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 193 | 1.02E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 375 | 586 | 9.1E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 209 | 3.9E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 374 | 6.1E-35 | - |
| SMART | SM00220 | serkin_6 | 298 | 567 | 2.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 577 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 417 | 429 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 600 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010687666.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QWT0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_132580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology