Basic Information
Locus ID:
Sbi_jg24312
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000028l | 10302491 | 10316717 | - | Sbi_jg24312 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 95,055.01 Da | 44.40 | 79.34 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 716 | 840 | 8.3E-11 | IPR003653 |
| Pfam | PF00069 | Protein kinase domain | 103 | 245 | 3.4E-18 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 34 | 101 | 9.8E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 269 | 6.41E-50 | IPR011009 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 669 | 842 | 2.16E-21 | IPR038765 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 21 | 74 | 6.2E-15 | - |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 663 | 843 | 8.0E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 75 | 259 | 1.2E-43 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 250 | 17.926872 | IPR000719 |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 625 | 806 | 10.221598 | IPR003653 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61590.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010677528.1 | probable serine/threonine-protein kinase PBL15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SY91 | Probable serine/threonine-protein kinase PBL15 OS=Arabidopsis thaliana OX=3702 GN=PBL15 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L6F2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |