Basic Information
Locus ID:
Sbi_jg24244
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000028l | 9583586 | 9585438 | - | Sbi_jg24244 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 38,940.16 Da | 39.07 | 86.74 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 173 | 2.03531E-70 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 1.53987E-76 | - |
| Pfam | PF00190 | Cupin | 13 | 154 | 6.6E-26 | IPR006045 |
| Pfam | PF00190 | Cupin | 198 | 338 | 2.8E-23 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 15 | 345 | 3.09E-52 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 189 | 4.1E-33 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 193 | 356 | 9.7E-52 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 3.9E-27 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 7.7E-17 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 1.3E-15 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021835696.1 | glutelin type-B 5-like [Spinacia oleracea] | 0 |
| A0A222NNM9 | Cocosin 1 OS=Cocos nucifera OX=13894 GN=COS-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R191 | 11S globulin OS=Spinacia oleracea OX=3562 GN=SOVF_118090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology