Basic Information
Locus ID:
Sbi_jg24154
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000028l | 8353940 | 8375026 | + | Sbi_jg24154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 101,469.25 Da | 44.43 | 83.31 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 314 | 868 | 1.5E-80 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 44 | 139 | 2.7E-24 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 311 | 868 | 2.75E-104 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 17 | 139 | 4.05E-28 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 614 | 882 | 2.0E-49 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 10 | 152 | 2.6E-37 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 297 | 508 | 7.9E-70 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 153 | 240 | 1.9E-11 | - |
| SMART | SM00695 | dusp | 39 | 142 | 2.6E-30 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 20 | 139 | 19.513391 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 313 | 893 | 55.20977 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 828 | 845 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 314 | 329 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 305 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_021856779.1 | ubiquitin carboxyl-terminal hydrolase 10-like [Spinacia oleracea] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L5D7 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology