Basic Information
Locus ID:
Sbi_jg23717
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000028l | 1260597 | 1268880 | + | Sbi_jg23717 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 80,043.54 Da | 48.40 | 75.38 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 85 | 174 | 3.20369E-8 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 445 | 691 | 3.29409E-126 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 439 | 689 | 1.6E-64 | IPR001245 |
| Pfam | PF00989 | PAS fold | 66 | 170 | 4.0E-9 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 66 | 174 | 2.62E-15 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 688 | 1.33E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 59 | 177 | 7.2E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 432 | 516 | 1.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 518 | 702 | 2.2E-58 | - |
| SMART | SM00091 | pas_2 | 64 | 131 | 5.0E-4 | IPR000014 |
| SMART | SM00220 | serkin_6 | 439 | 692 | 1.1E-53 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 70 | 174 | 4.9E-11 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 694 | 42.548298 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 62 | 104 | 8.558261 | IPR000014 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 445 | 466 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 558 | 570 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 513 | 526 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 618 | 640 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 599 | 609 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 552 | 570 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 662 | 684 | 2.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 424 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_010676532.1 | dual specificity protein kinase shkE isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJM6 | Serine/threonine-protein kinase CTR1 OS=Spinacia oleracea OX=3562 GN=SOVF_177990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology