Basic Information
Locus ID:
Sbi_jg23503
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 36568052 | 36578249 | - | Sbi_jg23503 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 84,224.65 Da | 44.95 | 75.09 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 434 | 694 | 4.1998E-85 | - |
| CDD | cd01989 | STK_N | 15 | 149 | 1.02569E-53 | - |
| Pfam | PF00582 | Universal stress protein family | 17 | 145 | 9.5E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 433 | 686 | 1.4E-40 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 146 | 5.78E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 687 | 7.69E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 395 | 500 | 3.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 705 | 3.0E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 13 | 147 | 1.7E-7 | IPR014729 |
| SMART | SM00220 | serkin_6 | 428 | 691 | 1.9E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 428 | 707 | 35.212753 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 546 | 558 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 756 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 756 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 212 | - | - |
| Coils | Coil | Coil | 361 | 393 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021763738.1 | U-box domain-containing protein 52-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N1Z3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology