Basic Information
Locus ID:
Sbi_jg23155
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 22058671 | 22067819 | - | Sbi_jg23155 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 87,005.45 Da | 53.66 | 73.39 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 461 | 721 | 2.59319E-86 | - |
| CDD | cd01989 | STK_N | 18 | 159 | 1.21529E-60 | - |
| Pfam | PF00582 | Universal stress protein family | 18 | 125 | 3.4E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 455 | 708 | 5.0E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 431 | 714 | 1.37E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 126 | 3.6E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 528 | 731 | 1.2E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 527 | 1.1E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 145 | 2.9E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 455 | 718 | 2.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 455 | 718 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 573 | 585 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 296 | - | - |
| Coils | Coil | Coil | 375 | 395 | - | - |
| Coils | Coil | Coil | 324 | 358 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_048494654.1 | LOW QUALITY PROTEIN: U-box domain-containing protein 51 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LYV6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology