Basic Information
Locus ID:
Sbi_jg23079
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 19639015 | 19645600 | + | Sbi_jg23079 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 91,344.60 Da | 48.60 | 72.62 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 31 | 184 | 1.7092E-52 | - |
| Pfam | PF00582 | Universal stress protein family | 31 | 161 | 3.1E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 491 | 732 | 3.6E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 471 | 751 | 3.28E-65 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 31 | 180 | 2.43E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 562 | 770 | 3.8E-46 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 30 | 183 | 6.3E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 561 | 6.6E-24 | - |
| SMART | SM00220 | serkin_6 | 489 | 758 | 6.0E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 758 | 32.923046 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 607 | 619 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 783 | 816 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 415 | 466 | - | - |
| Coils | Coil | Coil | 390 | 410 | - | - |
| Coils | Coil | Coil | 355 | 382 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010669606.1 | U-box domain-containing protein 35 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LZ29 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology